Job Description P0AC88 Confidence 99.27% Date Thu Jan 5 11:17:36 GMT 2012 Rank 128 Aligned Residues 176 % Identity 18% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																																																					.
Query SS confidence																												.																																																					.
Query Sequence		S	K	V	A	L	I	T	G	V	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	Y	.	E	V	H	G	I	K	R	R	A	S	S	F	N	T	E	R	V	D	H	I	Y	Q	D	P	H	T	C	N	P	K	F	H	L	H	Y	G	D	L	S	D	T	S	N	L	T	R	I	L	R	E	V	Q	.
Query Conservation																												.																																																					.
Alig confidence																												.																.	.																																				.
Template Conservation																																												.	.
Template Sequence		H	K	S	Y	V	I	T	G	G	L	G	G	F	G	L	Q	L	A	Q	W	L	R	L	R	G	A	Q	K	L	V	L	T	S	R	S	G	I	R	T	G	Y	Q	.	.	A	R	Q	V	R	E	W	R	R	Q	G	V	Q	V	L	V	S	T	S	N	A	S	S	L	D	G	A	R	S	L	I	T	E	A	T	Q
Template Known Secondary structure		T							S	T	T	S													T	T									S	S				S				.	.										T	T										S	S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		1884	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.			.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.
					80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.													.	.	.	.
Query SS confidence		.	.	.													.	.	.	.
Query Sequence		.	.	.	P	D	E	V	Y	N	L	G	A	M	S	H	.	.	.	.	V	A	V	S	F	E	S	P	E	Y	T	A	D	V	D	A	M	G	T	L	R	L	L	E	A	I	R	F	L	G	L	E	K	K	T	R	F	Y	Q	A	S	T	S	E	L	Y	G	L	V	Q	E	I	P	Q	K	E	T	T	P	F	Y
Query Conservation		.	.	.													.	.	.	.
Alig confidence		.	.	.													.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		L	G	P	V	G	G	V	F	N	L	A	M	V	L	R	D	A	V	L	E	N	Q	T	P	E	F	F	Q	D	V	S	K	P	K	Y	S	G	T	A	N	L	D	R	V	T	R	E	A	C	P	E	L	D	Y	F	V	I	F	S	S	V	S	C	G	R	G	N	A	G	Q	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S																	S	T	T			T	T						T	T	T	T																T	T														T	T		T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1962	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	S	P	Y	A	V	A	K	L	Y	A	Y	W	I	T	V	N	Y	R	E	S	Y	G	M	Y	A	C	N	G	I	L	F	N	H	E	S	P	R	R
Query Conservation
Alig confidence		.	.	.														.
Template Conservation		.	.	.														.
Template Sequence		.	.	.	N	Y	G	F	A	N	S	A	M	E	R	I	C	.	E	K	R	R	H	D	G	L	P	G	L	A	V	Q	W	G	A	I	G	D	V	G	V
Template Known Secondary structure		.	.	.														.						T	T	S										B		T	T	S	T
Template Predicted Secondary structure		.	.	.														.
Template SS confidence
					2033	.	.	.	.	.	.	2040	.	.	.	.	.		.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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