Job Description P0AC88 Confidence 99.22% Date Thu Jan 5 11:17:36 GMT 2012 Rank 155 Aligned Residues 225 % Identity 13% Template c2qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		S	K	V	A	L	I	T	G	V	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	Y	E	V	H	G	I	K	R	R	A	S	S	F	N	T	E	R	V	D	H	I	Y	Q	D	P	H	T	C	N	P	K	F	H	L	H	Y	G	D	L	S	D	T	S	N	L	T	R	.	.	.	.	.	.	I	L
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		G	Q	V	C	V	V	T	G	A	S	R	G	I	G	R	G	I	A	L	Q	L	C	K	A	G	A	T	V	Y	I	T	G	R	.	.	.	.	.	H	L	D	T	L	R	V	V	A	Q	E	A	Q	S	L	G	G	Q	C	V	P	V	V	C	D	S	S	Q	E	S	E	V	R	S	L	F	E	Q	V	D	R	E
Template Known Secondary structure		T						S	S	T	T	S													T	T								S	.	.	.	.	.																S	S									T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V	Q	P	D	E	V	Y	N	L	G	A	M	S	H	V	A	V	S	F	E	S	P	E	Y	T	A	D	V	D	A	M	G	T	L	R	L	L	E	A	I	R	F	L	G	L	E	K	K	T	R	F	Y	Q	A	S	T	S	E	L	Y	G	L	V	Q	E	I	P	Q	K	E	T	T	P	F	Y	P	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	G	R	L	D	V	L	V	N	N	A	Y	A	G	V	Q	T	I	L	N	T	R	N	K	A	F	W	E	T	P	A	S	M	W	D	D	I	N	N	V	G	L	R	G	H	Y	F	C	S	V	Y	G	A	R	L	M	V	P	A	G	Q	G	L	I	V	V	I	S	S	P	G	S	L	Q	Y	M	F	N	V
Template Known Secondary structure			T	T											T	T							T	T	T			T	T	T	S		T	T							T	T	T	T															G	G	G	T										G	G	G	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		P	Y	A	V	A	K	L	Y	A	Y	W	I	T	V	N	Y	R	E	S	Y	.	.	.	G	M	Y	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	T	F	V	T	R	K	I	T	R	A	I	A	N	I	A	Q	G	L	E	S	C	L	Y	L	G	N	M	D	S	L	R	D	W	G	H	A	K	D
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																														.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		P	Y	G	V	G	K	A	A	C	D	K	L	A	A	D	C	A	H	E	L	R	R	H	G	V	S	C	V	S	L	W	P	G	I	V	Q	T	E	L	L	S	S	A	E	T	T	E	L	S	G	K	C	V	V	A	L	A	T	D	P	N	I	L	S	L	S	G	K	.	.	.	.	.	.	V	L	P	S	C	D
Template Known Secondary structure																						G	G	G	T											S		T	T	T																			T		T	T	G	G	G	G	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.
		233	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	K	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	R	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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