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Job DescriptionP0AC88
Confidence99.19%DateThu Jan 5 11:17:36 GMT 2012
Rank179Aligned Residues238
% Identity11%Templatec2q2qG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:beta-d-hydroxybutyrate dehydrogenase; PDBTitle: structure of d-3-hydroxybutyrate dehydrogenase from pseudomonas putida
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA. . . . . . . LAEIARHGVKAVHHPADLSDVAQIEALFALAERE
Template Known Secondary structure  T
TT
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   5....10.........20.........30.........40... ......50.........60.........70.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMR. ARNWGRIINIASVHGLVGSTGKAAYVAAK
Template Known Secondary structure  SS
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T.TT


GGGTS

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   78.80.........90.........100.........110.........120....... ..130.........140.........150......
 
   162.......170.........180.........190.........200.........210....... ..220.........230.........
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Query Sequence  LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY. . LGNMDSLRDWGHAKDYVKMQWM
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Template Sequence  HGVVGLTKVVGLETATSNVTCNA. . . . . . . ICPGWVLTPLVQKQIDDRAAPLQAQHDLLAEKQPSLAFVTPEHLGELVLF
Template Known Secondary structure  TTTSS.......



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   157..160.........170......... 180.........190.........200.........210.........220.........
 
   240..... ....250....
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Query Sequence  MLQQEQ. . . . PEDFVIATG
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Template Sequence  LCSEAGSQVRGAAWNVDGG
Template Known Secondary structure  SGGGTT

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   234.....240.........250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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