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Job DescriptionP0AC88
Confidence98.95%DateThu Jan 5 11:17:36 GMT 2012
Rank270Aligned Residues232
% Identity12%Templatec2pd6D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:estradiol 17-beta-dehydrogenase 8; PDBTitle: structure of human hydroxysteroid dehydrogenase type 8, hsd17b8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQ. . . . . . . . . ETVRLLNHAAFQADVSEARAARCLLEQVQACF
Template Known Secondary structure  T
TTTSTT
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   11........20.........30.........40......... 50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASK
Template Known Secondary structure  SS

S








GGG

TTT



T

TT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML
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Template Sequence  AGVIGLTQTAARELGRHGIRC. . . NSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLG. . . . . . . . . DPEDVADVVAFLA
Template Known Secondary structure  GGGT...
SB
STTTTTS
T
TT
S
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   174.....180.........190.... .....200.........210.........220........ .230.........240.
 
   242... ....250....
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Query Sequence  QQEQ. . . . PEDFVIATG
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Template Sequence  SEDSGYITGTSVEVTGG
Template Known Secondary structure  SGGGTT

S
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   242.......250........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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