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Job DescriptionP0AC88
Confidence99.32%DateThu Jan 5 11:17:36 GMT 2012
Rank111Aligned Residues236
% Identity14%Templatec2p68A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of aq_1716 from aquifex aeolicus vf5
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY. . . . GVKAHGVEMNLLSEESINKAFEEIYNL
Template Known Secondary structure  T
SS
SSTT
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TT
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   7..10.........20.........30.........40.........50..... ....60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTF. LVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK
Template Known Secondary structure  SS

S








GGG

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T


T

TT
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   83......90.........100.........110.........120. ........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML
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Template Sequence  AGLIGFTKSLAKELAPRN. . . VLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLG. . . . . . . . . RFGSPEEVANVVLFLC
Template Known Secondary structure  GGGT...
SB

GGGGGS
TT
TTS.........S
B
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   162.......170......... 180.........190.........200.........210... ......220.........
 
   242... ....250....
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Query Sequence  QQEQ. . . . PEDFVIATG
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Template Sequence  SELASYITGEVIHVNGG
Template Known Secondary structure  SGGGTT

S
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   230.........240......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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