Job Description P0AC88 Confidence 100.00% Date Thu Jan 5 11:17:36 GMT 2012 Rank 31 Aligned Residues 306 % Identity 26% Template c2p5uC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of thermus thermophilus hb8 udp-glucose 4-2 epimerase complex with nad Resolution 2.37 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	V	A	L	I	T	G	V	T	G	Q	D	G	S	Y	L	A	E	F	L	L	E	K	G	Y	E	V	H	G	I	K	R	R	A	S	S	F	N	T	E	R	V	D	H	I	Y	Q	D	P	H	T	C	N	P	K	F	H	L	H	Y	G	D	L	S	D	T	S	N	L	T	R	I	L	R	E	V	Q	P
Query Conservation
Alig confidence				.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	.	.	V	L	V	T	G	G	A	G	F	I	G	S	H	I	V	E	D	L	L	A	R	G	L	E	V	A	V	L	D	N	L	A	T	G	.	.	.	.	.	.	.	.	.	.	.	K	R	E	N	V	P	K	G	V	P	F	F	R	V	D	L	R	D	K	E	G	V	E	R	A	F	R	E	F	R	P
Template Known Secondary structure				.	.				T	T	T	T	S													T	T										S	S		.	.	.	.	.	.	.	.	.	.	.		G	G	G	S		T	T	S							T	T
Template Predicted Secondary structure				.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.												.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	Y	N	L	G	A	M	S	H	V	A	V	S	F	E	S	P	E	Y	T	A	D	V	D	A	M	G	T	L	R	L	L	E	A	I	R	F	L	G	L	E	K	K	T	R	F	Y	Q	A	S	T	S	E	L	Y	G	L	V	Q	E	I	P	Q	K	E	T	T	P	F	Y	P	R	S	P	Y	A	V	A
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		T	H	V	S	H	Q	A	A	Q	A	S	V	K	V	S	V	E	D	P	V	L	D	F	E	V	N	L	L	G	G	L	N	L	L	E	A	C	R	Q	Y	G	.	V	E	K	L	V	F	A	S	T	G	G	A	I	Y	G	E	V	P	E	G	E	R	A	E	E	T	W	P	P	R	P	K	S	P	Y	A	A	S
Template Known Secondary structure		S							S																			T													T	T	.		S												T					T	T			B		T	T	S						S
Template Predicted Secondary structure																																											.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		K	L	Y	A	Y	W	I	T	V	N	Y	R	E	S	Y	G	M	Y	A	C	N	G	I	L	F	N	H	E	S	P	R	R	G	E	T	F	V	T	R	K	I	T	R	A	I	A	N	I	A	Q	G	L	E	S	C	L	Y	L	.	.	.	.	G	N	M	D	S	L	R	D	W	G	H	A	K	D	Y	V	K	M
Query Conservation																																																												.	.	.	.
Alig confidence																																																												.	.	.	.
Template Conservation
Template Sequence		K	A	A	F	E	H	Y	L	S	V	Y	G	Q	S	Y	G	L	K	W	V	S	L	R	Y	G	N	V	Y	G	P	R	Q	D	P	H	G	E	A	G	V	V	A	I	F	A	E	R	V	L	K	G	L	P	V	T	L	Y	A	R	K	T	P	G	D	E	G	C	V	R	D	Y	V	Y	V	G	D	V	A	E	A
Template Known Secondary structure																															T	T			T	T	S	G	G	G											T	T								S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	M	M	L	Q	Q	E	Q	P	E	D	F	V	I	A	T	G	V	Q	Y	S	V	R	Q	F	V	E	M	A	A	A	Q	L	G	I	K	L	R	F	E	G	T	G	V	E	E	K	G	I	V	V	S	V	T	G	H	D	A	P	G	V	K	P	G	D	V	I	I	A	V	D	P	R	Y	F	R	P	A	E
Query Conservation
Alig confidence										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	L	A	L	F	S	L	.	E	G	I	Y	N	V	G	T	G	E	G	H	T	T	R	E	V	L	M	A	V	A	E	A	A	G	K	A	P	E	V	Q	P	A	P	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D
Template Known Secondary structure										.							S		S																	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure										.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																																.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	T	L	L	G	D	P	T	K	A	H	E	K	L	G	W	K	P	E	I	T	L	R	E	M	V	S	E	M	V	A	N	D	L	E	A
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		L	E	R	S	V	L	S	P	L	K	L	M	.	A	H	G	W	R	P	K	V	G	F	Q	E	G	I	R	L	T	V	D	H	F	R	G	A
Template Known Secondary structure			S	B			B							.	T	T	T					S															T
Template Predicted Secondary structure														.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions