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Job DescriptionP0AC88
Confidence99.07%DateThu Jan 5 11:17:36 GMT 2012
Rank232Aligned Residues212
% Identity12%Templatec2hq1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: crystal structure of orf 1438 a putative glucose/ribitol2 dehydrogenase from clostridium thermocellum
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD
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Template Sequence  GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA. . . . GINVVVAKGDVKNPEDVENMVKTAMDA
Template Known Secondary structure  T
SS
SSTT

TT
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   5....10.........20.........30.........40.........50... ......60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK
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Template Sequence  FGRIDILVNNAWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKII. . . . . . . . . . . . . . . . . . . . . . . . . NITSQANYAASK
Template Known Secondary structure  S





TT
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   81........90.........100.........110.........120... ......130.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML
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Template Sequence  AGLIGFTKSIAKEFAAKGIYC. . . NAVAPGIIKTDMTDVLPDKVKEMYLNNIPLK. . . . . . . . . RFGTPEEVANVVGFLA
Template Known Secondary structure  GGGT...
SB

TS
TTSTTS.........S
B
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   160.........170.........180 .........190.........200.........210. ........220.......
 
   242... ....250....
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Query Sequence  QQEQ. . . . PEDFVIATG
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Template Sequence  SDDSNYITGQVINIDGG
Template Known Secondary structure  SGGGTT

S
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   228.230.........240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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