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Job DescriptionP0AC88
Confidence99.31%DateThu Jan 5 11:17:36 GMT 2012
Rank115Aligned Residues229
% Identity10%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70........
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV. . .
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Template Sequence  DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG. . . . . . . . . . . . . . . . EAKYDHIECDVTNPDQVKASIDHIFKE
Template Known Secondary structure  T
T
SSTT
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   7..10.........20.........30.........40... ......50.........60.........70
 
   7980.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  . . QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP
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Template Sequence  YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS. . . . . . IITKNASA
Template Known Secondary structure  S









B
TTTS
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GGGT......S

TTB
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   71........80.........90.........100.........110.........120.........130...... ...140....
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM
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Template Sequence  YVTSKHAVIGLTKSIALDYAPL. . LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA
Template Known Secondary structure  TTT..S
SBSS
S
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B
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   145....150.........160...... ...170.........180.........190.........200.........210.........220..
 
   237..240..... ....250....
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Query Sequence  QWMMLQQEQ. . . . PEDFVIATG
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Template Sequence  VAFLASREASFITGTCLYVDGG
Template Known Secondary structure  SGGGTT

S
STT
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   223......230.........240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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