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Job DescriptionP0AC88
Confidence100.00%DateThu Jan 5 11:17:36 GMT 2012
Rank28Aligned Residues304
% Identity23%Templatec2c20D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of udp-glucose 4-epimerase
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEV
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Template Sequence  SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTG. . . . . . . . . . . HEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAV
Template Known Secondary structure  TTTSTT



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GGGS
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   3......10.........20.........30....... ..40.........50.........60.........70.
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  YNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY
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Template Sequence  MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKF. . . IFSSTAATYGEVDVDLITEETMTNPTNTYGETKLA
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   72.......80.........90.........100.........110... ......120.........130.........140........
 
   164.....170.........180.........190..... ....200.........210.........220. ........230.
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Query Sequence  AYWITVNYRESYGMYACNGILFNHESPRRGET. . . . . . FVTRKITRAIANIAQGLESCLYLGNM. . . . . . DSLRDWGHAK
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Template Sequence  IEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE
Template Known Secondary structure  TSS

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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   232.......240.... .....250.........260.........270.........280.........290.........300.......
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Query Sequence  DYVKMQWMMLQQE. . . . QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAV
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Template Sequence  DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT





TT
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   229230.........240.........250.........260.........270.........280...
 
   308.310.........320.........330...... ...340.........350..
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Query Sequence  DPRYFRPAEVETLLGDPTKAHEKLGWKPE. ITLREMVSEMVANDLE
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Template Sequence  . . . . . . AGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQK
Template Known Secondary structure  ......SS

SB

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   284.....290.........300.........310.........320...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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