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Job DescriptionP0AC88
Confidence99.15%DateThu Jan 5 11:17:36 GMT 2012
Rank201Aligned Residues245
% Identity13%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70..... ....80
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Query Sequence  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRIL. REVQP
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Template Sequence  SEVALVTGATSGIGLEIARRLGKEGLRVFVCAR. . . . . GEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER
Template Known Secondary structure  S
S
SSTT
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TT
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Query Sequence  DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
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Template Sequence  YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS
Template Known Secondary structure  T
S
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S
GGG

TTTTST


GGGTS

TT
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   161........170.........180.........190.........200.........210....... ..220.........230........
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Query Sequence  KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY. . LGNMDSLRDWGHAKDYVKMQW
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Template Sequence  KHGVVGFTKALGLELARTGITV. . . NAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA
Template Known Secondary structure  GGGT...
SB
STT

TTSTTSS
B
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   161........170.........180.. .......190.........200.........210.........220.........230.......
 
   239240..... ....250....
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Query Sequence  MMLQQEQ. . . . PEDFVIATG
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Template Sequence  YLIGPGAAAVTAQALNVCGG
Template Known Secondary structure  TSGGGTT

S
STT
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   238.240.........250.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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