Job Description P0A7H0 Confidence 99.25% Date Thu Jan 5 11:05:39 GMT 2012 Rank 71 Aligned Residues 343 % Identity 13% Template c3eukC_ PDB info PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer Resolution 4.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	T	R	L	L	I	R	D	F	R	N	I	E	T	A	D	L	A	L	S	P	G	F	N	F	L	V	G	A	N	G	S	G	K	T	S	V	L	E	A	I	Y	T	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	R	A	F	R	S	L	Q	I	G	R	V	I	R	H	E	Q	E	A
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	R	S	L	T	L	I	N	W	N	G	F	F	A	R	T	F	D	F	D	E	L	V	T	T	L	S	G	G	N	G	A	G	K	S	T	T	M	A	G	F	V	T	A	L	I	P	D	L	T	L	L	N	F	R	N	T	T	E	A	G	S	T	S	S	D	K	G	L	Y	G	K	L	K	A	G	V	C	Y
Template Known Secondary structure												T	T							B			S	S	B							T	T	S	S																T	T	T						T	T		S	S							S	T	T	T	T	B		S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.																			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	L	H	G	R	L	Q	G	E	E	R	E	T	A	I	G	L	T	K	D	K	Q	G	D	S	K	.	.	.	.	.	.	V	R	I	D	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	K	V	A	E	L	A	H	L	M	P	M	Q	L	I	T	P	E	G	F	T
Query Conservation																													.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	L	E	T	V	N	S	R	A	Q	R	I	I	T	G	V	R	L	Q	Q	I	A	G	R	D	K	K	V	D	I	R	P	F	S	L	Q	N	V	P	M	T	D	S	V	I	S	L	F	T	E	Q	V	A	N	K	A	R	V	L	S	L	N	D	L	K	E	K	F	E	E	T	A	V	T	F	K	P	Y	H
Template Known Secondary structure									T	T															T	T	S															T	T	S		G	G	G	G	S				B	T	T	B															S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	L	N	G	G	P	K	Y	R	R	A	F	.	L	D	W	G	C	F	H	N	E	P	G	F	F	T	A	W	S	N	L	K	R	L	L	K	Q	R	N	A	A	L	R	Q	V	T	R	Y	E	Q	L	R	P	W	D	K	E	L	I	P	L	A	E	Q	I	S	T	W	R	A	E	Y	S	A	G	I	A	A	D
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		S	I	T	D	Y	H	S	F	M	F	D	L	G	I	L	P	K	R	L	R	S	S	S	D	R	N	K	F	Y	K	L	I	E	A	S	L	Y	G	G	I	S	S	V	I	T	K	S	L	R	D	Y	L	L	P	E	N	S	G	V	R	Q	A	F	Q	D	M	E	A	A	L	R	E	S	A	E	S	V	A	N	I
Template Known Secondary structure		S											T	T	S		S	S				S																		S			T					T																												T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																																						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	D	T	C	K	Q	F	L	P	E	F	S	L	T	F	S	F	Q	R	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	E	T	E	Y	A	E	V	L	E	R	N	F	E	R	D	R	Q	L	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	T	I	Q	R	E	Q	N	R	I	L	Q	L	N	Q	G	L	Q	N	I	A	F	G	Q	V	K	G	V	R	L	V	V	N	I	R	D	T	H	S	I	L	L	N	A	L	S	D	Q	H	E	Q	H	K	D	S	F	S	E	A	L	A	M	L	Y	K	R	I	N	P	H	I	Q	T	I	G	E	E	L
Template Known Secondary structure																			T	S	S	S			B	T	T	B																				T	T	T																															T
Template Predicted Secondary structure
Template SS confidence
		1272	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.									.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																		.	.	.	.																																				.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																																				.	.	.	.	.	.	.	.
Query Sequence		Y	T	A	H	G	P	H	K	A	D	L	R	I	R	A	D	.	.	.	.	G	A	P	V	E	D	T	L	S	R	G	Q	L	K	L	L	M	C	A	L	R	L	A	Q	G	E	F	L	T	R	E	S	G	R	R	.	.	.	.	.	.	.	.	C	L	Y	L	I	D	D	F	A	S	E	L	D	D	E	R	R
Query Conservation																		.	.	.	.																																				.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																																				.	.	.	.	.	.	.	.									.
Template Conservation																																																																									.
Template Sequence		L	D	Y	R	N	Y	L	D	L	E	V	E	T	L	R	G	A	Y	G	W	M	R	A	E	S	S	A	L	S	T	G	E	A	I	G	T	G	M	S	I	L	L	M	V	V	Q	S	W	E	E	E	S	R	R	M	R	A	K	D	I	L	P	C	R	L	L	F	L	D	Q	A	.	A	R	L	D	A	M	S	I
Template Known Secondary structure		T	S	S	G	G	G										S	S	S	S						G	G	G	S																					T	G	G	G	T	T	T	S		T	T										S	S	G	.	G	G	S		S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		1366	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.		.	.	.	1440	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	A	S	R	L	K	A	T	Q	S	Q	V	F	V	S	A	I	S	A	E	H	V	I	D	M	S	D	E	N	S	K	M	F	T	V
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		N	T	L	F	E	L	C	E	R	L	D	M	Q	L	L	I	A	A	P	E	.	.	.	.	.	N	I	S	P	E	R	G	T	T	Y	K	L
Template Known Secondary structure												T								S	S	.	.	.	.	.	S				S	S	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		1445	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.						.	.	.	.	.	1470	.	.	.	.	.	.