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Job DescriptionP0A7H0
Confidence99.49%DateThu Jan 5 11:05:39 GMT 2012
Rank64Aligned Residues176
% Identity25%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  NIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGD
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Template Sequence  EVEPGEIRKGE. VIGIVGPNGIGKTTFVKMLAGVEEPTEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   359360......... 370.........380.........390.......
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  SKVRIDGTDGHKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYE
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   173......180.........190.........200.........210.........220.........230.........240.........250..
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Query Sequence  QLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFERDRQLTYTAHGPH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KVEWDLTVAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTEL
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SSB
T
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   398.400.........410.........420.........430.........440.
 
   253......260.........270.........280.........290.........300.........310.........320... .....
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Query Sequence  KADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKAT. . . . QSQVF
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Template Sequence  LKPLGIIDLYDRNVEDLSGGELQRVAIAATLLR. . . . . . . . . DADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTAL
Template Known Secondary structure  T
TTTTTSBGGG

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   442.......450.........460.........470.... .....480.........490.........500.........510..
 
   329330.........340.........350.....
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Query Sequence  VSAISAEHVIDMSDENSKMFTVEKGKI
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Template Sequence  VVEHDVLMIDYVS. DRLIVFEGEPGRH
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   513......520..... ....530........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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