Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7H0
Confidence99.75%DateThu Jan 5 11:05:39 GMT 2012
Rank7Aligned Residues98
% Identity20%Templatec1ii8A_
PDB info PDB header:replicationChain: A: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40......... 50.........60.........70.........
Predicted Secondary structure 
















.















Query SS confidence 
















































.





























Query Sequence  MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHG. RAFRSLQIGRVIRHEQEAFVLHGRLQGEER
Query Conservation 
 
  
 
 


      
     





 








 

  
   .                    
         
Alig confidence 
















































.





























Template Conservation 
 
  
 
 

       
 
   
  
 
 








 

   
                                 
Template Sequence  MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGT
Template Known Secondary structure 
SSSS
SS

SS






TTSSTTS

TT

TTS
SS
TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90........
Predicted Secondary structure 





Query SS confidence 


















Query Sequence  ETAIGLTKDKQGDSKVRID
Query Conservation                     
Alig confidence 


















Template Conservation       
             
Template Sequence  KYRITRRFLKGYSSGEIHA
Template Known Secondary structure 
TTS
Template Predicted Secondary structure 





Template SS confidence 


















   81........90.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions