Job Description P77257 Confidence 98.11% Date Thu Jan 5 12:26:54 GMT 2012 Rank 100 Aligned Residues 171 % Identity 9% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	Q	G	E	V	H	A	L	L	G	G	N	G	A	G	K	S	T	L	M	K	I	I	A	G	I	T	P	A	D	S	G	T	L	E	I	E	G	N	N	Y	V	R	L	T	P	V	H	A	H	Q	L	G	I	Y	L	V	P	Q	E	P	L	L	F	P	S	L	S	I	K	E	N	I	L	F	G	L	A	K
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	.	.	.	.	.	.	.	.	.	.	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F
Template Known Secondary structure		B		T	T									T	T	S	S														T	T	T								S	S	S													.	.	.	.	.	.	.	.	.	.		T	T								S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.											.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																															.	.								.	.	.	.	.	.	.
Query SS confidence																																															.	.								.	.	.	.	.	.	.
Query Sequence		K	Q	L	S	M	Q	K	M	K	N	L	L	A	A	L	G	C	Q	F	D	L	H	S	L	A	G	S	L	D	V	A	D	R	Q	M	V	E	I	L	R	G	L	M	R	D	.	.	S	R	I	L	I	L	D	.	.	.	.	.	.	.	E	P	T	A	S	L	T	P	A	E	T	E	R	L	F	S	R	L	Q
Query Conservation																																															.	.								.	.	.	.	.	.	.
Alig confidence																																															.	.								.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K
Template Known Secondary structure			S	S														T	S								S			B														T	S	S	S										G	G	G	S	B		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		185	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.																				.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	A	T	.	G	V	G	I	V	F	I	S	H	K	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	R	Q	I	A	D	R	I	S	V	M	R
Query Conservation							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q	L	S	R	Q	V	E	Q	R	Q	D	K	R	P	M	L	S	D	L	R	E	S	G	Q	L	E	Q	D	A	D	I	I	E	F	L	Y
Template Known Secondary structure								T											G	G	G	T	T	S	S	S					G	G	G	G	T	T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions