Job Description P77257 Confidence 96.99% Date Thu Jan 5 12:26:54 GMT 2012 Rank 171 Aligned Residues 132 % Identity 16% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	G	E	V	H	A	L	L	G	G	N	G	A	G	K	S	T	L	M	K	I	I	A	G	I	T	P	A	D	S	G	T	L	E	I	E	G	N	N	Y	V	R	L	T	P	V	H	A	H	Q	L	G	I	Y	L	V	P	Q	E	P	L	L	F	P	S	L	S	I	K	E	N	I	L	F	G	L	A	K	K
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											B		T	T	S	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T										T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	M	Q	K	M	K	N	L	L	A	A	L	G	C	Q	F	D	L	H	S	L	A	G	S	L	D	V	A	D	R	Q	M	V	E	I	L	R	G	L	M	R	D	S	R	I	L	I	L	D	E	P	T	A	S	L	T	P	A	E	T	E	R	L	F	S	R	L	Q	E	L	L	A	T	G	V	G	I	V
Query Conservation
Alig confidence		.																	.	.	.
Template Conservation		.																	.	.	.
Template Sequence		.	T	P	Y	R	V	A	S	A	I	A	E	A	V	G	V	R	.	.	.	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	I	N	Q	E	L	V	S	L	V
Template Known Secondary structure		.	S													S			.	.	.			S	S																T	T	S		S								T	T	T					S	T	T											G	G	G
Template Predicted Secondary structure		.																	.	.	.
Template SS confidence
			103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	S	H	K	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	T	N	S	L	G
Template Known Secondary structure					S		S	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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