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Job DescriptionP77257
Confidence96.75%DateThu Jan 5 12:26:54 GMT 2012
Rank225Aligned Residues117
% Identity15%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  VHALLGGNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSM
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Template Sequence  LWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AAR
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   119120.........130.........140.........150.........160........ .170.........180.........190......
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Query Sequence  QKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPT. ASLTPAETERLFSRLQELLATGVGIVFI
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Template Sequence  EQLRLLGEKVGVPVLEVMDGE. . SPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVL. . GPDEVLLV
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   143......150.........160... ......170.........180.........190.........200......... 210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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