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Job DescriptionP77257
Confidence96.70%DateThu Jan 5 12:26:54 GMT 2012
Rank237Aligned Residues113
% Identity20%Templatec1s3sA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  DFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFG
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Template Sequence  AIGVKPPRGILLYGPPGTGKTLIARAVANETGAF. . FFLINGPEIMSKLAGES. . . . . . . . . . . . . . . . . . . . . . . . . . .
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   232.......240.........250.........260..... ....270.........280..
 
   111........120.........130.........140.........150.........160...... ...170.........180
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Query Sequence  LAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDE. . . . . . . . . . PTASLTPAETERLF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL
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   283......290.........300.........310.........320.........
 
   181....... .190.........200.....
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Query Sequence  SRLQELLA. TGVGIVFISHKLPEIRQ
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Template Sequence  TLMDGLKQRAHVIVMAATNRPNSIDP
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GGG
S
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G
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   330.........340.........350.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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