Job Description P77257 Confidence 98.15% Date Thu Jan 5 12:26:54 GMT 2012 Rank 99 Aligned Residues 185 % Identity 15% Template c1mkyA_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains Resolution 1.90 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	A	L	L	G	G	N	G	A	G	K	S	T	L	M	K	I	I	A	G	I	T	P	A	D	S	G	T	L	E	I	E	G	N	N	Y	V	R	L	T	P	V	H	A	H	Q	L	G	I	Y	L	V	P	Q	E	P	L	L	F	P	S	L	S	I	K	E	N	I	L	F	G	L	A	K	K	Q	L	S	M
Query Conservation
Alig confidence																							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	L	I	V	G	R	P	N	V	G	K	S	T	L	F	N	K	L	V	K	.	.	D	P	V	Q	D	T	V	E	W	Y	G	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	S											.	.			S							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	M	K	N	L	L	A	A	L	G	C	Q	F	D	L	H	S	L	A	G	S	L	D	V	A	D	R	Q	M	V	E	I	L	R	G	L	M	R	D	S	R	I	L	I	L	D	E	P	T	A	S	L	T	P	A	E	T	E	R	L	F	S	R	L	Q	E	L	L	A	T	G	V	G	I	V	F	I	S	H
Query Conservation
Alig confidence		.	.	.	.	.	.																											.	.																										.	.	.	.
Template Conservation		.	.	.	.	.	.																											.	.																										.	.	.	.
Template Sequence		.	.	.	.	.	.	F	K	L	V	D	T	C	G	V	F	D	N	P	Q	D	I	I	S	Q	K	X	K	E	V	T	L	.	.	N	X	I	R	E	A	D	L	V	L	F	V	V	D	G	K	R	G	I	T	K	E	D	E	S	.	.	.	.	L	A	D	F	L	R	K	S	T	V	D	T	I	L	V	A	N
Template Known Secondary structure		.	.	.	.	.	.							T	T	T	T	S	S	G	G	G												.	.				T	T		S								T	T	T									.	.	.	.									T
Template Predicted Secondary structure		.	.	.	.	.	.																											.	.																										.	.	.	.
Template SS confidence
								51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		K	L	P	E	I	R	Q	.	.	.	.	I	A	D	R	I	S	V	M	R	D	G	T	I	A	L	S	G	K	T	S	E	L	S	T	D	D	I	I	Q	A	I	T	P	A	V	R	E	K	S	L	S	A	S	Q	K	L	W	L	E	L	P	G	N	R	P	Q	H	A	A	G	T	P	V	L	T	L	E	N	L
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	E	N	L	R	E	F	E	R	E	V	K	P	E	L	Y	S	L	G	F	G	E	P	I	P	V	S	A	E	H	N	I	N	L	D	T	X	L	E	T	I	I	K	K	L	E	E	K	G	L	D	L	E	S	K	P	E	I	T	D	A	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S			S								T					G	G	G	S	S		S					B	T	T	T	T	B	S															T	T			S	S	S						S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	G	F	R	N	V	S	L	T	L	N	A	G	E	I	L	G	L	A	G	L	V	G	A	G	R	T	E	L	A	E	T	L	Y	G	L	R	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	I	V	G	R	P	N	V	G	K	S	T	L	F	N	A	I	L	N	K	E	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	T	T	S	S										T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions