Job Description P0A9T8 Confidence 96.17% Date Thu Jan 5 11:11:21 GMT 2012 Rank 335 Aligned Residues 120 % Identity 16% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		K	R	G	E	T	I	A	L	V	G	E	S	G	S	G	K	S	T	L	L	A	I	L	A	G	L	D	.	.	D	G	S	S	G	E	V	S	L	V	G	Q	P	L	H	N	M	D	E	E	A	R	A	K	L	R	A	K	H	V	G	F	V	F	Q	S	F	M	L	I	P	T	L	N	A	L	E	N	V	E	L
Query Conservation																													.	.
Alig confidence					.																								.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	G	.	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		.								S	S	S	S																	T	T								S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.															.	.	.
Query SS confidence																																																					.	.	.	.															.	.	.
Query Sequence		P	A	L	L	R	G	E	S	S	A	E	S	R	N	G	A	K	A	L	L	E	Q	L	G	L	G	K	R	L	D	H	L	P	A	Q	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	F	N	.	.	.	.	G	R	P	D	V	L	F	A	D	E	P	T	G	N	.	.	.	L	D	R	Q	T	G	D	K
Query Conservation																																																					.	.	.	.															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																									.	.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	S	M	G	V	D	.	P	E	R	V	I	H	T	P	V	Q	S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	R	A	K	T	M	K	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T			.	G	G	G							S	B														T			T	T										S	T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
																					100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	L	L	F	S	L	N	R	E	H	G	T	T	L	I	M	V	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I	A	I	N	H
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions