Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9T8
Confidence98.25%DateThu Jan 5 11:11:21 GMT 2012
Rank103Aligned Residues145
% Identity21%Templatec2recB_
PDB info PDB header:helicasePDB COMPND:
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  VKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELP
Query Conservation 
  

   
 
 








  
 
   
  
 
 
 
                  
  
 
   
    

 
 
   
Alig confidence 






































......


































Template Conservation     
 
  
 
 

 




 
         
  




...... 
          

 
   
        
      
Template Sequence  LPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFID. . . . . . AEHALDPIYARKLGVDIDNLLCSQPDTGEQALEIC
Template Known Secondary structure  TTS



TTSSTT


......SS



TT

TTT


SS
Template Predicted Secondary structure 












......












Template SS confidence 















































































   56...60.........70.........80.........90.... .....100.........110.........120.........
 
   113......120.........130.........140.........150.........160.........170..... ....180....
Predicted Secondary structure 




















........


Query SS confidence 






























































. . . . . . . .








Query Sequence  ALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTG. . . . . . . . NLDRQTGDK
Query Conservation                    
  
 
          

 

 


 

 

   
 







 ........


      
Alig confidence 



............................................














........








Template Conservation    

............................................      






  
    
     

    
Template Sequence  DALA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RSGAVDVIVVDSVAALTPKAEIEGLAARMMSQ
Template Known Secondary structure  ............................................T


S
TTS




Template Predicted Secondary structure  ............................................












Template SS confidence 















































































   130... ......140.........150.........160.....
 
   185....190.........200....... ..210.. .......220.......
Predicted Secondary structure 




..



Query SS confidence 






















.




.














Query Sequence  IADLLFSLNREHGTTLIMVTHDL. QLAAR. CDRCLRLVNGQLQEE
Query Conservation 
   
  
      


  

  .     . 
 
 

  
 



Alig confidence 






















.




.














Template Conservation      
   
      

 


 
                   
  
Template Sequence  AMRKLAGNLKQSNTLLIFINQTGGNALKFYASVRLDIRRIGAVKE
Template Known Secondary structure  TTT







T
S
Template Predicted Secondary structure 
















Template SS confidence 












































   174.....180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions