Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9T8
Confidence98.78%DateThu Jan 5 11:11:21 GMT 2012
Rank89Aligned Residues142
% Identity22%Templatec2o8bA_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:dna mismatch repair protein msh2; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g t mispair
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.... .....20.........30.........40.........50........ .60.........70.
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Query Sequence  PAENIVEVHHLKK. SVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAG. . . . . . . . . LDDGSSGEVSLVG
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Template Sequence  KGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVD
Template Known Secondary structure  TT
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   627..630.........640.........650.........660.........670.........680.........690.........700......
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  QPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGE
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Template Sequence  CILARVG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STFM
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   707..710... ....
 
   152.......160.. .......170.........180.........190...... ...200.........210..
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Query Sequence  QQRVALARAFN. . GRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH. GTTLIMVTHDLQLAAR
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Template Sequence  AEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTAL
Template Known Secondary structure  TT

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   727..730.........740.........750.........760.........770.........780.........790
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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