Job Description P0A9T8 Confidence 100.00% Date Thu Jan 5 11:11:21 GMT 2012 Rank 6 Aligned Residues 211 % Identity 36% Template c2it1B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii Resolution 1.94 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	H	H	L	K	K	S	V	G	Q	G	E	H	E	L	S	I	L	T	G	V	E	L	V	V	K	R	G	E	T	I	A	L	V	G	E	S	G	S	G	K	S	T	L	L	A	I	L	A	G	L	D	D	G	S	S	G	E	V	S	L	V	G	Q	P	L	H	N	M	D	E	E	A	R	A	K	L	R
Query Conservation
Alig confidence														.	.	.	.																																																													.	.	.	.
Template Conservation														.	.	.	.																																																													.	.	.	.
Template Sequence		I	K	L	E	N	I	V	K	K	F	G	N	.	.	.	.	F	T	A	L	N	N	I	N	L	K	I	K	D	G	E	F	M	A	L	L	G	P	S	G	S	G	K	S	T	L	L	Y	T	I	A	G	I	Y	K	P	T	S	G	K	I	Y	F	D	E	K	D	V	T	E	L	P	P	K	D	R	.	.	.	.
Template Known Secondary structure												T	T	.	.	.	.													T	T									T	T	S	S										T	S	S			S							T	T				T	T	S						.	.	.	.
Template Predicted Secondary structure														.	.	.	.																																																													.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	H	V	G	F	V	F	Q	S	F	M	L	I	P	T	L	N	A	L	E	N	V	E	L	P	A	L	L	R	G	E	S	S	A	E	S	R	N	G	A	K	A	L	L	E	Q	L	G	L	G	K	R	L	D	H	L	P	A	Q	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	F	N	G	R	P	D
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	N	V	G	L	V	F	Q	N	W	A	L	Y	P	H	M	T	V	Y	K	N	I	A	F	P	L	E	L	R	K	A	P	R	E	E	I	D	K	K	V	R	E	V	A	K	M	L	H	I	D	K	L	L	N	R	Y	P	W	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	L	V	K	E	P	E
Template Known Secondary structure		.	.	T						T	T					T	T	S													T	T																	T	T		G	G	G	T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure		.	.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		V	L	F	A	D	E	P	T	G	N	L	D	R	Q	T	G	D	K	I	A	D	L	L	F	S	L	N	R	E	H	G	T	T	L	I	M	V	T	H	D	L	Q	L	A	.	A	R	C	D	R	C	L	R	L	V	N	G	Q	L	Q	E	E
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		V	L	L	L	D	E	P	L	S	N	L	D	A	L	L	R	L	E	V	R	A	E	L	K	R	L	Q	K	E	L	G	I	T	T	V	Y	V	T	H	D	Q	A	E	A	L	A	M	A	D	R	I	A	V	I	R	E	G	E	I	L	Q	V
Template Known Secondary structure							S	G	G	G	G	S																				T								S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions