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Job DescriptionP0A9T8
Confidence100.00%DateThu Jan 5 11:11:21 GMT 2012
Rank19Aligned Residues206
% Identity34%Templatec1vciA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEE
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Template Sequence  MVE. . . VKLENLTKRFGN. . . . FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK
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...TT....
TT


TTSSTSS

STT
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GG
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   10.. .......20.... .....30.........40.........50.........60.........70.........80..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  ARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
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Template Sequence  D. . . . . . RNISMVFQ. . . . . . HMTVYENIAFP. . LKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARA
Template Known Secondary structure  G......TT

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   83 ......90. ........100.. .......110.........120.........130.........140........
 
   161........170.........180.........190.........200.........210 .........220.......
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Query Sequence  FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLA. ARCDRCLRLVNGQLQEE
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Template Sequence  IVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQI
Template Known Secondary structure  TT

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   157..160.........170.........180.........190.........200.........210.........220....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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