Job Description P0A9T8 Confidence 98.70% Date Thu Jan 5 11:11:21 GMT 2012 Rank 92 Aligned Residues 134 % Identity 28% Template c1ewqA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution Resolution 2.20 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.
Query Sequence		T	G	V	E	L	V	V	K	R	G	E	T	I	A	L	V	G	E	S	G	S	G	K	S	T	L	L	A	I	L	A	G	.	.	.	.	.	.	.	.	.	L	D	D	G	S	S	G	E	V	S	L	V	G	Q	P	L	H	N	M	D	E	E	A	R	A	K	L	R	A	K	H	V	G	F	V	F	Q	S	F
Query Conservation																																		.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																								.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	L	E	X	A	.	.	.	H	E	L	V	L	I	T	G	P	N	X	A	G	K	S	T	F	L	R	Q	T	A	L	I	A	L	L	A	Q	V	G	S	F	V	P	A	E	E	A	H	L	P	L	F	D	G	I	Y	T	R	I	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	.	.	.	S							S		S	S	S	S																T	T	T			B	S	S	S								S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	I	P	T	L	N	A	L	E	N	V	E	L	P	A	L	L	R	G	E	S	S	A	E	S	R	N	G	A	K	A	L	L	E	Q	L	G	L	G	K	R	L	D	H	L	P	A	Q	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	F	N	G	R	P	D	V	L	F	A	D	E	P	T	G	N	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	S	T	F	X	V	.	.	.	.	.	.	.	.	.	E	X	E	E	V	A	L	I	L	K	E	A	T	E	N	S	L	V	L	L	D	E	V	G	R	G	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S					.	.	.	.	.	.	.	.	.														T	T							S	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
																																							635	.	.	.	.	640	.										.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		D	R	Q	T	G	D	K	I	A	D	L	L	F	S	L	N	R	E	H	G	T	T	L	I	M	V	T	H	D	L	Q	L	A	A	R	.	C	D	R	C	L	R	L	V	N	G	Q	L	Q	E	E
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		S	S	L	D	G	V	A	I	A	T	A	V	A	E	A	L	H	E	R	R	A	Y	T	L	F	A	T	H	Y	F	E	L	T	A	L	G	L	P	R	L	K	N	L	H	V	A	A	R	E	E	A
Template Known Secondary structure																					T														T				T	T												S
Template Predicted Secondary structure
Template SS confidence
		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions