Job Description P30864 Confidence 32.29% Date Thu Jan 5 11:46:41 GMT 2012 Rank 361 Aligned Residues 202 % Identity 7% Template d2nxoa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.04

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	R	I	D	A	A	T	P	V	V	L	H	F	L	M	P	L	I	K	P	F	R	E	R	Y	P	E	V	T	L	S	L	V	S	S	E	T	I	I	N	L	I	E	R	K	V	D	V	A	I	R	A	G	T	L	T	D	S	S	L	R	A	R	P	L	F	N	S	Y	R	K	I	I	A	S	P	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	P	R	V	G	H	I	Q	F	L	N	C	L	P	L	Y	W	G	L	A	R	T	G	T	L	L	D	F	E	L	T	K	D	T	P	E	K	L	S	E	Q	L	V	R	G	D	L	D	I	G	P	V	T	L	V	E	F	L	K	N	A	D	D	L	V	A	F	P	D	I	A	V	G	C	D	G	P	V	M
Template Known Secondary structure											S	G	G	G										T	S	G	G	G	G																	T	T	S		S												T	G	G	G												S	S			S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		I	S	R	Y	G	K	P	E	T	I	D	D	L	K	Q	H	I	C	L	G	F	T	E	P	A	S	L	N	T	W	P	I	A	R	S	D	G	Q	L	H	E	V	K	Y	G	L	S	S	N	S	G	E	T	L	K	Q	L	C	L	S	G	.	N	G	I	A	C	L	S	D	Y	M	I	D	K	E	I	A	R	G
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		S	C	V	I	V	S	Q	V	P	L	D	R	L	D	G	A	R	V	A	L	G	S	T	S	R	T	S	V	R	L	A	Q	L	L	L	S	E	R	F	G	V	Q	P	D	Y	Y	T	C	P	P	D	L	S	L	M	A	A	V	L	I	G	D	A	A	L	R	A	N	M	I	D	G	P	R	Y	G	L	D	V	H
Template Known Secondary structure		S						S	S		T	T	S		S	S	S						T	T		S													T	S													S	S																	T					T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		E	L	V	E	L	M	A	D	K	V	L	P	V	E	M	P	F	S	A	V	Y	Y	S	D	.	.	R	A	V	S	T	R	I	R	A	F	I	D	F	L	S	E	H	V	K
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		D	L	G	A	L	W	K	E	W	T	G	L	P	F	V	F	A	V	W	A	A	R	R	D	Y	A	E	R	E	P	V	I	T	R	K	V	H	E	A	F	L	A	S	R	N
Template Known Secondary structure												S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions