Job Description P30864 Confidence 31.44% Date Thu Jan 5 11:46:41 GMT 2012 Rank 363 Aligned Residues 209 % Identity 8% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		P	R	G	L	L	R	I	D	A	A	T	P	V	V	L	H	F	L	M	P	L	I	K	P	F	R	E	R	Y	P	E	V	T	L	S	L	V	S	S	.	.	E	T	I	I	N	L	I	E	R	K	V	D	V	A	I	R	A	G	T	L	T	D	S	S	L	R	A	R	P	L	F	N	S	Y	R	K	I	I	A
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		K	D	E	T	V	G	V	G	V	L	S	E	P	H	A	R	L	L	E	I	A	K	E	E	V	K	K	Q	H	I	E	L	R	I	V	E	F	T	N	Y	V	A	L	N	E	A	V	M	R	G	D	I	L	M	N	F	F	Q	H	V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	L	V	S	V	G	N	V
Template Known Secondary structure												S	T	T														T	T	T									S												T	S	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	P	D	Y	I	S	R	Y	G	K	P	E	T	I	D	D	L	K	Q	H	I	C	L	G	F	T	E	P	A	S	L	N	T	W	P	I	A	R	S	D	G	Q	L	H	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	G	L	S	S	N	S	G	E	T	L	K	Q	L
Query Conservation		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	E	P	L	A	L	Y	S	R	T	Y	R	H	V	S	D	F	P	A	G	A	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E	D	V	Q	Q	N	V	R	N	V	V	L	Q	E	V	E	S	A	L	L	P	R
Template Known Secondary structure											S	S			S	G	G	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																														.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.
Query Sequence		C	L	S	G	N	G	I	A	C	L	S	D	Y	M	I	D	K	E	I	A	R	G	E	L	V	E	L	M	A	D	K	V	L	P	V	E	M	P	F	S	A	V	Y	Y	S	D	R	A	V	S	T	R	I	R	A	F	I	D	F	L	.	.	.	.	.	S	E	H	V	K	T	A	P	G	G	A
Query Conservation																																																														.	.	.	.	.
Alig confidence																																				.																										.	.	.	.	.
Template Conservation																																				.
Template Sequence		V	F	D	Q	V	D	G	A	V	I	N	G	N	Y	A	I	M	A	G	L	S	A	R	R	D	G	L	A	V	E	P	D	A	S	.	A	Y	A	N	V	L	V	V	K	R	G	N	E	A	D	A	R	V	Q	A	V	L	R	A	L	C	G	G	R	V	R	T	Y	L	K	E	R	Y	K	G	G
Template Known Secondary structure			G	G	G	S	S												T	T			T	T	T	T		S				S		G	G	.	G	G								T	T		T	T												T	S												T	T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions