Return to main results Retrieve Phyre Job Id

Job DescriptionP30864
Confidence99.73%DateThu Jan 5 11:46:41 GMT 2012
Rank16Aligned Residues208
% Identity9%Templated1utha_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120....... ..130.........140.........150.........160.....
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Query Sequence  RNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTLSLV. . SSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRK
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Template Sequence  PFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFFQRRLFRHRY
Template Known Secondary structure  TTT





TT

TTSS
TS



TT

TT
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  IIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLSDYMID
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Template Sequence  VCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFAV
Template Known Secondary structure  TT
SS

SS

S

TTSGGGGTT


SSSTTTSS
B
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   246...250.........260.........270.........280.........290......
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Query Sequence  KEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTA
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Template Sequence  RCEVPFGLTTSPHPAKLP. DIAINLFWHAKYNRDPGNMWLRQLFVELFSEA
Template Known Secondary structure  TTTTT
SS


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GGGTT


T
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   252.......260......... 270.........280.........290.........300.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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