Job Description P30864 Confidence 84.00% Date Thu Jan 5 11:46:41 GMT 2012 Rank 208 Aligned Residues 195 % Identity 15% Template d1twya_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.65

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																												.	.	.	.
Query SS confidence																																				.	.	.																												.	.	.	.
Query Sequence		L	L	R	I	D	A	A	T	P	V	V	L	H	F	L	M	P	L	I	K	P	F	R	E	R	Y	P	E	V	T	L	S	L	V	.	.	.	S	S	E	T	I	I	N	L	I	E	R	K	V	D	V	A	I	R	A	G	T	L	T	D	S	S	L	.	.	.	.	R	A	R	P	L	F	N	S	Y	R	K	I
Query Conservation																																				.	.	.																												.	.	.	.
Alig confidence													.																							.	.	.																												.	.	.	.
Template Conservation													.
Template Sequence		E	I	T	I	S	G	S	T	S	V	A	.	R	I	X	D	V	L	A	E	K	Y	N	Q	Q	H	P	E	T	Y	V	A	V	Q	G	V	G	S	T	A	G	I	S	L	L	K	K	G	V	A	D	I	A	X	T	S	R	Y	L	T	E	S	E	A	Q	N	T	L	H	T	F	T	L	A	F	D	G	L	A	I
Template Known Secondary structure													.															T	T								S											T	T	S		S					S	S				T	T	T			T	T
Template Predicted Secondary structure													.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Query Sequence		I	A	S	P	D	Y	I	S	R	Y	G	K	P	E	T	I	D	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	H	I	C	L	G	F	T	E	P	A	S	L	N	T	W	P	I	A	R	S	D	G	Q	L	.	.	.	.	.	.	.	.	.	H	E	V	K	Y	G	L	S	S	N	S
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	N	Q	A	N	P	V	T	N	L	T	R	E	Q	L	Y	G	I	Y	K	G	Q	I	T	N	W	K	Q	V	G	G	N	D	Q	K	I	A	V	V	T	R	E	A	S	S	G	T	R	Y	S	F	E	S	L	X	G	L	T	K	T	V	K	D	R	E	V	S	D	V	A	P	T	A	L	V	V	N	S	N
Template Known Secondary structure					T	T																	T	S			B	G	G	G	G	T	S		S		B								T	T												T						T	T						S		T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		G	E	T	L	K	Q	L	C	L	S	G	N	G	I	A	C	L	S	D	Y	M	I	D	K	E	I	A	R	G	E	L	V	E	L	M	A	D	K	.	.	.	.	.	.	V	L	P	V	E	M	P	F	S	A	V	Y	Y	S	D	R	A	V	S	T	R	I	R	A	F	I	D	F	L	S
Query Conservation																																								.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.													.
Template Conservation																																																										.
Template Sequence		S	X	X	K	T	L	V	N	H	N	T	Q	A	V	G	F	I	S	I	G	S	V	D	K	S	V	K	A	I	Q	F	E	K	A	D	P	T	S	D	N	I	A	K	H	T	Y	Q	L	S	R	P	F	L	I	L	H	.	Y	S	D	N	A	D	E	Q	T	K	E	F	I	A	F	L	K
Template Known Secondary structure												T	T							G	G	G			T	T	S						T	T	B									T	T		S											.		T	T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions