Job Description P30864 Confidence 89.32% Date Thu Jan 5 11:46:41 GMT 2012 Rank 196 Aligned Residues 67 % Identity 16% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		A	T	S	E	E	L	A	I	F	V	S	V	V	E	S	G	.	S	F	S	R	A	A	E	Q	L	G	Q	A	N	S	A	V	S	R	A	V	K	K	L	E	M	K	L	G	V	S	L	L	N	R	T	T	R	Q	L	S	L	T	E	E	G	E	R	Y	F	R	R	V	Q	S
Query Conservation																		.
Alig confidence																		.																															.	.	.
Template Conservation																																																	.	.	.
Template Sequence		L	S	D	T	E	R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	.	.	.	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S
Template Known Secondary structure																T	T											T												S	G	G	G	T	T				.	.	.							S	S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions