 |
Job Description | P09130 | Confidence | 95.63% | Date | Thu Jan 5 11:01:56 GMT 2012 |
Rank | 194 | Aligned Residues | 53 |
% Identity | 15% | Template | c3ewsA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:atp-dependent rna helicase ddx19b; |
PDBTitle: human dead-box rna-helicase ddx19 in complex with adp
|
Resolution | 2.70 Å |
|
 |
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | I | I | R | D | S | E | I | Q | N | F | C | L | H | G | T | V | G | A | G | K | S | E | V | I | R | R | L | A | N | Y | A | . |
. |
. |
. |
. |
R | Q | R | G | D | M | V | V | I | Y | D | R | S | G | E | F | V | K | S | Y | Y | D |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |   | . | . | . | . | . |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   | . | . |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |
Template Sequence |   |
L | P | L | M | L | A | E | P | P | Q | N | L | I | A | Q | S | Q | S | G | T | G | K | T | A | A | F | . |
. |
V | L | A | M | L | S | Q | V | E | P | A | N | K | Y | P | Q | C | L | C | L | S | P | T | Y | E | L | A | L | Q | T | G | K |
Template Known Secondary structure |   |
 |  |  |  | S |
| S | S |
|
|  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
|
| T | T | S |
| S |
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|