 |
Job Description | P09130 | Confidence | 96.59% | Date | Thu Jan 5 11:01:56 GMT 2012 |
Rank | 58 | Aligned Residues | 49 |
% Identity | 16% | Template | c2wv9A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin |
PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus
|
Resolution | 2.75 Å |
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | I | Q | N | F | C | L | H | G | T | V | G | A | G | K | S | . |
E | V | I | R | R | L | A | N | Y | A | R | Q | R | G | D | M | V | V | I | Y | D | R | S | G | E | F | V | K | S | Y | Y | D |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|   |
|
|
|
|
|
| . |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
Template Sequence |   |
K | K | R | Q | L | T | V | L | D | L | H | P | G | A | G | K | T | R | R | I | L | P | Q | I | I | K | D | A | I | Q | K | R | L | R | T | A | V | L | A | P | T | R | V | V | A | A | E | M | A | E |
Template Known Secondary structure |   |
S | T | T |
|  |  |  |  |
|
|
| T | T | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|