Return to main results Retrieve Phyre Job Id

Job DescriptionP09130
Confidence96.54%DateThu Jan 5 11:01:56 GMT 2012
Rank64Aligned Residues37
% Identity22%Templatec2j37W_
PDB info PDB header:ribosomeChain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........
Predicted Secondary structure 













Query SS confidence 




































Query Sequence  SEIQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIY
Query Conservation      
 



 





  
  

      
   

 
Alig confidence 




































Template Conservation   

 






 
 




 



    
 
 

 

Template Sequence  TKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLI
Template Known Secondary structure 
SS
STTSSTT

Template Predicted Secondary structure 












Template SS confidence 




































   97..100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions