Job Description P09130 Confidence 94.41% Date Thu Jan 5 11:01:56 GMT 2012 Rank 366 Aligned Residues 58 % Identity 19% Template c1xpuB_ PDB info PDB header:transcription/rna Chain: B: PDB Molecule:rho transcription termination factor; PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb) Resolution 3.05 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.
Predicted Secondary structure																													.	.	.	.																							.
Query SS confidence																													.	.	.	.																							.
Query Sequence		Q	N	F	C	L	H	G	T	V	G	A	G	K	S	E	V	I	R	R	L	A	N	Y	A	R	Q	R	.	.	.	.	G	D	M	V	V	I	Y	D	R	S	G	E	F	V	K	S	Y	Y	D	P	S	I	.	D	K	I	L	N	P	L	D	A
Query Conservation																													.	.	.	.																							.
Alig confidence																													.	.	.	.																							.
Template Conservation
Template Sequence		Q	R	G	L	I	V	A	P	P	K	A	G	K	T	M	L	L	Q	N	I	A	Q	S	I	A	Y	N	H	P	D	C	V	L	M	V	L	L	I	D	E	R	P	E	E	V	T	E	M	Q	R	L	V	K	G	E	V	V	A	S	T	F	D	E
Template Known Secondary structure										S	S	S	S																	T	T	S																						S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions