Job Description P09130 Confidence 95.93% Date Thu Jan 5 11:01:56 GMT 2012 Rank 147 Aligned Residues 41 % Identity 24% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	S	E	I	Q	N	F	C	L	H	G	T	V	G	A	G	K	S	E	V	I	R	R	L	A	N	Y	A	R	Q	R	G	D	M	V	V	I	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	T	K	L	P	F	I	I	M	L	V	G	V	Q	G	S	G	K	T	T	T	A	G	K	L	A	Y	F	Y	K	K	R	G	Y	K	V	G	L	V	A
Template Known Secondary structure		S		S	S	S	S								S	S	S	S	S	S	T	T	T										T	T	S					B
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions