Phyre 2 alignment of P77775 with d2blla1

Job Description P77775
Confidence 100.00% Date Thu Jan 5 12:32:44 GMT 2012

Rank 51 Aligned Residues 287

% Identity 14% Template d2blla1

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 2.3

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.															.	.	.	.	.	.
Query SS confidence																										.															.	.	.	.	.	.
Query Sequence	M	N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	.	Q	I	T	V	V	T	R	N	P	Q	K	A	S	S	.	.	.	.	.	.	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E	P	I	A	D
Query Conservation																										.															.	.	.	.	.	.
Alig confidence																										.															.	.	.	.	.	.
Template Conservation
Template Sequence	M	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P
Template Known Secondary structure							T		S	S													S	T	T								S			G	G	G	G	G	G	T	T		T	T								T	T	T		S											S						B
Template Predicted Secondary structure
Template SS confidence
	316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	.	.	.	.	.	.	.	H	N	E	F	T	H	K	L	C	A	R	W	E	E
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence							.	.																																																				.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence	I	E	Y	T	R	N	.	.	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V
Template Known Secondary structure						S	.	.									T													T	T									G	G	G	G	B	T				S	S	B		T	T	T				B				T	T		G	G	G
Template Predicted Secondary structure							.	.
Template SS confidence
	396	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

	147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	I	A	C	R	A	Q	S	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	.	.	.	.	.	.	.	.	.	.	.	.	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N
Template Known Secondary structure																			S				S	S				T	T		S	B	S		B														T						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.

	215	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																												.																																		.
Query SS confidence					.	.	.	.	.																												.																																		.
Query Sequence	E	L	R	G	.	.	.	.	.	P	F	N	M	V	S	P	Y	P	V	R	N	E	Q	F	A	H	A	L	G	H	A	L	H	R	P	A	.	I	L	R	V	P	A	T	A	I	R	L	L	M	G	E	S	S	V	L	V	L	G	G	Q	R	A	L	P	K	R	L	E	E	.	A	G	F	A	F	R	W	Y	D
Query Conservation					.	.	.	.	.																												.																																		.
Alig confidence					.	.	.	.	.																												.							.	.	.	.	.	.	.																					.								.
Template Conservation																																												.	.	.	.	.	.	.																													.
Template Sequence	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	.	.	.	.	.	.	.	F	A	G	F	R	V	V	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D	W	E	P	K	I	.	D
Template Known Secondary structure	G	G	G	T	T	T	T								T	T	S																	T		T	T	G	G	G	S			.	.	.	.	.	.	.													B																.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.																													.
Template SS confidence
	554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.								.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.		.

	288	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	E	E	A	L	A	D	V	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence	M	Q	E	T	I	D	E	T	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	638	.	640	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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