Phyre 2 alignment of P77775 with d1xgka

Job Description P77775
Confidence 99.93% Date Thu Jan 5 12:32:44 GMT 2012

Rank 69 Aligned Residues 267

% Identity 17% Template d1xgka_

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 1.40

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence	N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	.	.	.	.	.	.	.	.	S	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E	P	I	A	D
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	T	I	A	V	V	G	A	T	G	R	Q	G	A	S	L	I	R	V	A	A	A	V	G	H	H	V	R	A	Q	V	H	S	L	K	G	L	I	A	E	E	L	Q	A	I	P	N	V	T	L	F	Q	G	P	L	L	N	N	V	P	L	M	D	T	L	F	E	G	A	H	L	A	F	I	N	T	T	S	Q	A	G
Template Known Secondary structure						S	T	T	S													T	T								S		S		S								T	S	T	T						S			T	T										T	T		S								S	T	T	S
Template Predicted Secondary structure
Template SS confidence
	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

	74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E	E	I	A	C	R	A	Q	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	A	I	G	K	D	L	A	D	A	A	K	R	A	G	T	I	Q	H	Y	I	Y	S	S	M	P	D	.	.	.	.	.	.	.	.	.	H	S	L	Y	G	P	W	P	A	V	P	M	W	A	P	K	F	T	V	E	N	Y	V	.	.	.	.	R	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																S			S										.	.	.	.	.	.	.	.	.	G	G	G	T	S	S					T	T	T											.	.	.	.		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
	87														.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140

	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.																													.	.	.	.
Query SS confidence																																.	.	.	.																													.	.	.	.
Query Sequence	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	I	L	G	K	M	L	P	P	F	R	L	G	.	.	.	.	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	.	.	.	.	D	N	E	L	R	G	P	F	N	M	V	S	P
Query Conservation																																.	.	.	.																													.	.	.	.
Alig confidence																																.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence	L	G	L	P	S	T	F	V	Y	A	G	I	Y	N	N	N	F	T	S	L	P	Y	P	L	F	Q	M	E	L	M	P	D	G	T	F	E	W	H	A	P	F	D	P	D	I	P	L	P	W	L	D	A	E	H	D	V	G	P	A	L	L	Q	I	F	K	D	G	P	Q	K	W	N	G	H	R	I	A	L	T	F
Template Known Secondary structure	S	S	S											G	G	G		B	S	S	S		S	S		B					T	T	S							S	S		T	T	S																											T	T							S
Template Predicted Secondary structure
Template SS confidence
	141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

	226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																									.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																					.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	Y	P	V	R	N	E	Q	F	A	H	A	L	G	H	A	L	H	R	P	A	.	I	L	R	V	P	A	T	A	I	R	L	L	M	G	E	S	S	V	L	V	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	R	A	L	P	K	R	L	E	E	A	G
Query Conservation																					.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	E	T	L	S	P	V	Q	V	C	A	A	F	S	R	A	L	N	R	R	V	T	Y	V	Q	V	P	K	V	E	I	K	V	N	I	P	V	G	Y	R	E	Q	L	E	A	I	E	V	V	F	G	E	H	K	A	P	Y	F	P	L	P	E	F	S	P	G	G	V	I	S	Q	R	V	T	D	E	A	R	K	L	W
Template Known Secondary structure																	T	S								S	S					S																		T	T	S				S	S		S	G	G	G			T	T						T	T
Template Predicted Secondary structure
Template SS confidence
	221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

	281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	A	F	R	W	Y	D	L	E	E	A	L	A	D	V	V
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence	S	G	W	R	.	.	D	M	E	E	Y	A	R	E	V	F
Template Known Secondary structure	T	T			.	.									T
Template Predicted Secondary structure					.	.
Template SS confidence
	326	.	.	.			330	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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