Return to main results Retrieve Phyre Job Id

Job DescriptionP77775
Confidence100.00%DateThu Jan 5 12:32:44 GMT 2012
Rank8Aligned Residues289
% Identity14%Templated1oc2a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30........ .40.........50.........60.......
Predicted Secondary structure 
.













............











Query SS confidence 

.



































. . . . . . . . . . . .




























Query Sequence  MN. IVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKAS. . . . . . . . . . . . SVLGPRVTLWQGLADQSNLNGVDAVINLA
Query Conservation 

.







 

  
   
   
  
    
      ............       
                     
Alig confidence 

.



































............




























Template Conservation 

 










  

  

  
  
    
                   
  
  

 
                  
Template Sequence  FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA
Template Known Secondary structure 
STTTS
TT



TT

GGGTGGG
SSS

TT
TT
S

Template Predicted Secondary structure 




































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   68.70.........80.........90.........100.........110........ .120.........130........
Predicted Secondary structure 
















.........












Query SS confidence 


















































. . . . . . . . .



















Query Sequence  GEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYY. . . . . . . . . GDLGEVVVTEEEPPHNEFTH
Query Conservation                                             
       .........                 
  
Alig confidence 


















































.........



















Template Conservation                                          
   
                                   
Template Sequence  AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSS
Template Known Secondary structure  S




TT
GGGG

B

GGGSTTTT
STTSSB
TTS




S
Template Predicted Secondary structure 





























































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   139140.........150.........160.........170.. .......180.........190.........200.........210....
Predicted Secondary structure 













....















Query SS confidence 

































. . . .









































Query Sequence  KLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGG. . . . ILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN
Query Conservation   
                   
 
   
 
    ....                            
 
 
         
Alig confidence 

































....









































Template Conservation   
                           
                                    
 
 
         
Template Sequence  TKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK
Template Known Secondary structure 



STT

TTST


TTS


Template Predicted Secondary structure 
































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   215 ....220.........230.........240.........250.........260.........270........ .280.........290..
Predicted Secondary structure 
.


























.








Query SS confidence 
.






























































.













Query Sequence  E. LRGPFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEE. AGFAFRWYDLEEAL
Query Conservation   .      
      
  
    
    
       
                         
  .

       
   
Alig confidence 
.































........






















.













Template Conservation         

      
  
    
    
     ........                
  

   

  
    




Template Sequence  GRMGETYLIGADGEKNNKEVLELILEKMGQPKDA. . . . . . . . YDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGL
Template Known Secondary structure 

TT


S
TT

TT
........S


TT


B

B





S


Template Predicted Secondary structure 















........


















Template SS confidence 















































































   244.....250.........260.........270....... ..280.........290.........300.........310.....
 
   293....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  ADVVR
Query Conservation     
 
Alig confidence 




Template Conservation       
Template Sequence  EETIQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   316...320
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions