Return to main results Retrieve Phyre Job Id

Job DescriptionP77775
Confidence98.87%DateThu Jan 5 12:32:44 GMT 2012
Rank148Aligned Residues216
% Identity14%Templated1fmca_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 ......... 50.........60.....
Predicted Secondary structure 















........




........




Query SS confidence 






































. . . . . . . .








. . . . . . . .















Query Sequence  NIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSV. . . . . . . . LGPRVTLWQ. . . . . . . . GLADQSNLNGVDAVIN
Query Conservation 








 

  
   
   
  
    
        ........     
   ........                
Alig confidence 






































........








........















Template Conservation 







 


 


  
   

 
    
                        
                        
Template Sequence  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDIL
Template Known Secondary structure  TTTTSTTT
S
TT



TT
SS

Template Predicted Secondary structure 








































Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   66...70.........80.........90.........100.........110.........120.........130.........140....
Predicted Secondary structure 





























.
Query SS confidence 














































































.
Query Sequence  LAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARW.
Query Conservation                                               
                        
   
    .
Alig confidence 



























































....














.
Template Conservation                                                       
      ....      
  

     
Template Sequence  VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK. . . . NINMTSYASSKAAASH
Template Known Secondary structure 








TT

TT


GGGT

....
TT
Template Predicted Secondary structure 



















































....



Template SS confidence 















































































   93......100.........110.........120.........130.........140.........150.. .......160........
 
   145....150.........160......... 170.........180.........190.........200.........210......
Predicted Secondary structure  ..










..




















....
Query SS confidence  . .
























. .














































. . . .
Query Sequence  . . EEIACRAQSDKTRVCLLRTGVVLAP. . DGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNEL. . . .
Query Conservation  ..               
 
   
 
 ..                               
 
 
           ....
Alig confidence  ..
























..


















........



















....
Template Conservation       
 
     
 

 
 

 
 
                   
  ........
   




  
 

 
  
  

Template Sequence  LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR. . . . . . . . RLGQPQDIANAALFLCSPAASWVS
Template Known Secondary structure  TTT
SB
STT

T
SS
........S
B
SGGGTT

Template Predicted Secondary structure 
























........








Template SS confidence 















































































   169170.........180.........190.........200.........210...... ...220.........230.........240
 
   217..220.........
Predicted Secondary structure 







Query SS confidence 












Query Sequence  RGPFNMVSPYPVR
Query Conservation       
      
Alig confidence 












Template Conservation 
  
 



    
Template Sequence  GQILTVSGGGVQE
Template Known Secondary structure  S
STTS


Template Predicted Secondary structure 






Template SS confidence 












   241........250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions