Job Description P77775 Confidence 97.15% Date Thu Jan 5 12:32:44 GMT 2012 Rank 385 Aligned Residues 108 % Identity 20% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																											.	.																.	.	.	.	.	.	.	.
Query SS confidence																											.	.																.	.	.	.	.	.	.	.
Query Sequence		M	N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	.	.	Q	I	T	V	V	T	R	N	P	Q	K	A	S	S	V	.	.	.	.	.	.	.	.	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E	P
Query Conservation																											.	.																.	.	.	.	.	.	.	.
Alig confidence										.																	.	.																.	.	.	.	.	.	.	.																														.
Template Conservation										.																																																																							.
Template Sequence		N	K	I	T	V	V	G	V	.	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	A	G	S	K	L	V	V	I	T	A	G	A	.
Template Known Secondary structure		S								.	S												T	T	T			S							S															T	G	G	G										S	S	G	G	G	G	T	T		S									.
Template Predicted Secondary structure										.																																																																							.
Template SS confidence
		21	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	R	Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	I	L	V	V	S	N
Template Known Secondary structure		.	.	.				T	T																										T	T							S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions