Job Description P77775 Confidence 98.83% Date Thu Jan 5 12:32:44 GMT 2012 Rank 161 Aligned Residues 197 % Identity 16% Template c3v2hB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-beta-hydroxybutyrate dehydrogenase; PDBTitle: the crystal structure of d-beta-hydroxybutyrate dehydrogenase from2 sinorhizobium meliloti Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.														.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	.	.	.	.	.	.	.	G	V	D
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	V	I	T	G	S	T	S	G	I	G	L	A	I	A	R	T	L	A	K	A	G	A	N	I	V	L	N	G	F	G	A	P	D	E	I	R	T	V	T	D	E	V	A	G	L	S	S	G	T	V	L	H	H	P	A	D	X	T	K	P	S	E	I	A	D	X	X	A	X	V	A	D	R	F	G	G	A	D
Template Known Secondary structure							S		S	S													T	T							S																T	T		S	S									T	T																	S	S		S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	N	L	A	G	E	P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		I	L	V	N	N	A	G	V	Q	F	V	E	K	I	E	D	F	P	V	E	Q	W	D	R	I	I	A	V	N	L	S	S	S	F	H	T	I	R	G	A	I	P	P	X	K	K	K	G	W	G	R	I	I	N	I	A	S	A	H	G	L	.	.	.	.	.	V	A	S	P	F	K	S	A	Y	V	A	A	K	H
Template Known Secondary structure															G	G	G														T																		T										G	G	G	T	.	.	.	.	.	S			T	T
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																																.	.
Query SS confidence														.	.	.																																																																.	.
Query Sequence		A	R	W	E	E	I	A	C	R	A	Q	S	.	.	.	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	.	.
Query Conservation														.	.	.																																																																.	.
Alig confidence														.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	X	G	L	T	K	T	V	A	L	E	V	A	E	S	G	V	T	V	N	S	I	C	P	G	Y	V	L	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	K	K	F	I	T	V	E	Q	V	A	S	L	A	L	Y	L	A	G	D	D	A	A	Q
Template Known Secondary structure														T	G	G	G	T										S	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S		B														S	G	G	G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
				217	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	G	P	F	N	M	V	S	P	Y	P
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		I	T	G	T	H	V	S	X	D	G	G	W	T
Template Known Secondary structure				S						S	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions