Job Description P77775 Confidence 99.64% Date Thu Jan 5 12:32:44 GMT 2012 Rank 86 Aligned Residues 195 % Identity 12% Template c3r6dA_ PDB info PDB header:lyase, isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine Resolution 1.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	.	.	.	A	S	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E	P	I	A	D	K	R	W	T	H
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.																																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Y	I	T	I	L	G	A	A	G	Q	I	A	Q	L	T	A	T	L	L	T	Y	T	D	X	H	I	T	L	Y	G	R	Q	L	K	T	R	I	P	P	E	I	I	D	H	E	R	V	T	V	I	E	G	S	F	Q	N	P	G	L	E	Q	A	V	T	N	A	E	V	V	F	V	G	A	X	E	S	G	.	.	.
Template Known Secondary structure							S	T	T	S	T	T	T																			S	S					S						T	S	T	T								T	T									T	T		S					S						.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E	E	I	A	C	R	A	Q	S	D	K	T	R	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																											.																													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																											.																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	D	X	A	S	I	V	K	A	L	S	R	N	I	R	R	V	I	G	V	S	X	A	G	L	S	.	G	E	F	P	V	A	L	E	K	W	T	F	D	N	L	P	I	S	Y	V	Q	G	E	R	Q	A	R	N	.	.	.	.	V	L	R	E	S	N	L	N	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							T	T	T	T	.	S		S											T	S														.	.	.	.					S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																											.																													.	.	.	.
Template SS confidence
														83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		C	L	L	R	T	G	V	V	L	A	P	D	G	G	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	.	.	.	.	.	R	G	P	F	N	M	V	S	P	Y	P
Query Conservation																																																												.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	L	R	L	T	W	L	Y	N	D	P	E	.	.	.	.	.	.	.	.	.	.	.	T	D	Y	E	L	I	P	E	G	A	Q	F	N	D	A	Q	V	S	R	E	A	V	V	K	A	I	F	D	I	L	H	A	A	D	E	T	P	F	H	R	T	S	I	G	V	G	E	P	G	T
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.								T	T	S																					T		S			G	G	G	T	T								T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions