Job Description P77775 Confidence 98.76% Date Thu Jan 5 12:32:44 GMT 2012 Rank 191 Aligned Residues 212 % Identity 13% Template c3r1iB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	I	T	G	A	S	T	G	I	G	K	K	V	A	L	A	Y	A	E	A	G	A	Q	V	A	V	A	A	R	H	S	D	A	L	Q	V	V	A	D	E	I	A	G	V	G	G	K	A	L	P	I	R	C	D	V	T	Q	P	D	Q	V	R	G	M	L	D	Q	M	T	G	E	L	G	G	I	D	I	A
Template Known Secondary structure						S	S	T	T	S													T	T								S	S	G	G	G	G										T	T										T	T																	S			S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	E	P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	C	N	A	G	I	V	S	V	Q	A	M	L	D	M	P	L	E	E	F	Q	R	I	Q	D	T	N	V	T	G	V	F	L	T	A	Q	A	A	A	R	A	M	V	D	Q	G	L	G	G	T	I	I	T	T	A	S	M	S	G	H	I	I	N	I	P	Q	Q	V	S	H	Y	C	T	S	K	A	A	V	V	H
Template Known Secondary structure													G	G	G														T																		T	S										G	G	G	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		146	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.
Predicted Secondary structure										.	.	.																																																																.	.	.	.
Query SS confidence										.	.	.																																																																.	.	.	.
Query Sequence		E	I	A	C	R	A	Q	S	.	.	.	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	.	.	.	.	R	G
Query Conservation										.	.	.																																																																.	.	.	.
Alig confidence										.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	K	A	M	A	V	E	L	A	P	H	Q	I	R	V	N	S	V	S	P	G	Y	I	R	T	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	W	E	P	K	I	P	L	G	R	M	G	R	P	E	E	L	T	G	L	Y	L	Y	L	A	S	A	A	S	S	Y	M	T	G	S
Template Known Secondary structure											G	G	G	T											B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	S	T	T	S	S		B		G	G	G	T									S	G	G	G	T	T			S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	N	M	V	S	P	Y	P	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V	I	D	G	G	Y	T	C	P
Template Known Secondary structure						S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions