Job Description P77775 Confidence 98.88% Date Thu Jan 5 12:32:44 GMT 2012 Rank 140 Aligned Residues 214 % Identity 13% Template c3ioyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: structure of putative short-chain dehydrogenase (saro_0793)2 from novosphingobium aromaticivorans Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	.	.	.	.	.	.	.	.	.	.	.	.	S	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	.	.	.	.	.	.	.	G	V	D	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	F	V	T	G	G	A	N	G	V	G	I	G	L	V	R	Q	L	L	N	Q	G	C	K	V	A	I	A	D	I	R	Q	D	S	I	D	K	A	L	A	T	L	E	A	E	S	G	P	E	V	M	G	V	Q	L	D	V	A	S	R	E	G	F	K	M	A	A	D	E	V	E	A	R	F	G	P	V	S	I
Template Known Secondary structure							T	T	T	S	T											T	T	T								S														T				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		V	I	N	L	A	G	E	P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	.	F	T	H	K	L	C
Query Conservation																																																																											.
Alig confidence																																																																											.
Template Conservation
Template Sequence		L	C	N	N	A	G	V	N	L	F	Q	P	I	E	E	S	S	Y	D	D	W	D	W	L	L	G	V	N	L	H	G	V	V	N	G	V	T	T	F	V	P	R	M	V	E	R	V	K	A	G	E	Q	K	G	G	H	V	V	N	T	A	S	M	A	A	F	L	A	A	G	S	P	G	I	Y	N	T	T	K	F
Template Known Secondary structure														G	G	G														T																				T	T	S												G	G	G	T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		142	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		A	R	W	.	.	.	E	E	I	A	C	R	A	Q	S	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	R
Query Conservation					.	.	.
Alig confidence					.	.	.																																																				.	.
Template Conservation																																																											.	.
Template Sequence		A	V	R	G	L	S	E	S	L	H	Y	S	L	L	K	Y	E	I	G	V	S	V	L	C	P	G	L	V	K	H	E	F	G	M	E	P	D	V	I	G	A	R	V	I	E	A	M	K	A	N	R	L	H	I	F	S	H	.	.	P	D	H	K	E	E	L	R	E	V	F	D	E	I	I	A	E	Y	Q	D
Template Known Secondary structure															G	G	G	T											B				S	S	B																T		S						.	.	G	G	G														T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions