Phyre 2 alignment of P77775 with c3i5mA

Job Description P77775
Confidence 99.94% Date Thu Jan 5 12:32:44 GMT 2012

Rank 65 Aligned Residues 265

% Identity 14% Template c3i5mA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera

Resolution 2.72 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.													.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	N	I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	A	S	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	V	L	I	A	G	A	T	G	F	I	G	Q	F	V	A	T	A	S	L	D	A	H	R	P	T	Y	I	L	A	R	P	G	P	R	S	P	S	K	A	K	I	F	K	A	L	E	D	K	G	A	I	I	V	Y	G	L	I	N	E	Q	E	A	M	E	K	I	L	K	E	H	E	I	D	I	V	V	S	T	V
Template Known Secondary structure							T	T	S													T	T									S	S																T	T								T	T													T
Template Predicted Secondary structure
Template SS confidence
	12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	I	A	D	K	R	W	T	H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E	E	I	A	C
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																													.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																													.	.
Template Sequence	G	G	E	S	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	A	L	V	K	A	M	K	A	V	G	T	I	K	R	F	L	P	S	E	.	.	.	.	.	.	.	F	G	H	D	V	N	R	A	D	P	V	E	P	G	L	N	M	Y	R	E	K	R	R	V	R	Q	L	V	.	.
Template Known Secondary structure		T	T	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S					S		.	.	.	.	.	.	.		S	S		T	T	T					T	T																.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																													.	.
Template SS confidence
	92	.	.	.	.	.	.																.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence	R	A	Q	S	D	K	T	R	V	C	L	L	R	T	G	V	V	L	A	P	D	G	G	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	R	G	.	.	.	P	F	N	M	V	S	P	Y
Query Conservation																																																																						.	.	.
Alig confidence	.	.																						.	.	.	.																																											.	.	.
Template Conservation	.	.																						.	.	.	.
Template Sequence	.	.	E	E	S	G	I	P	F	T	Y	I	C	C	N	S	I	A	S	W	P	Y	Y	.	.	.	.	N	N	V	L	P	P	T	D	F	F	Q	I	Y	G	D	G	N	V	K	A	Y	F	V	A	G	T	D	I	G	K	F	T	M	K	T	V	D	D	V	R	T	L	N	K	S	V	H	F	R	P	S	C	N
Template Known Secondary structure	.	.			T	T			B									S	S					.	.	.	.		.					S	S						T	T	S																				T	T		G	G	G	T	T								G	G	G
Template Predicted Secondary structure	.	.																						.	.	.	.
Template SS confidence
			148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

	227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.																			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	P	V	R	N	E	Q	F	A	H	A	L	G	H	A	L	H	R	P	A	.	I	L	R	V	P	A	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	L	L	M	G	E	S	S	V	L	V	L	G	G	Q	R	A	L	P	K	R	L	E	E	A	G	F	A	F	R	W	Y	D
Query Conservation																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	C	L	N	I	N	E	L	A	S	V	W	E	K	K	I	G	R	T	L	P	R	V	T	V	T	E	D	D	L	L	A	A	A	G	E	N	I	I	P	Q	S	V	V	A	A	F	T	H	D	I	F	I	K	G	C	Q	V	N	F	S	I	D	G	P	E	D	V	E	V	T	T	L	Y	P	E	D	S	F	R	T
Template Known Secondary structure																T	S																	T	T			T	T													T	T		T	T	T	S	S				S	T	T								S	T	T
Template Predicted Secondary structure
Template SS confidence
	227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

	288	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	E	E	A	L	A	D	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence	V	E	E	C	F	G	E	Y	I
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
	307	.	.	310	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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