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Job DescriptionP77775
Confidence98.44%DateThu Jan 5 12:32:44 GMT 2012
Rank274Aligned Residues199
% Identity12%Templatec3i1jB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase, short chain PDBTitle: structure of a putative short chain dehydrogenase from2 pseudomonas syringae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........ .40.........50.........60
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Query Sequence  NIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKAS. . . . . . . . . . . . . . . . . . . . . SVLGPRVTLWQGLADQSNLNGV
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Template Sequence  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRL
Template Known Secondary structure  S
SSTT
S
TT





TTT

S

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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   61........70.........80.........90.........100.........110.........120.........130.........140
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Query Sequence  DAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKL
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Template Sequence  DGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATE
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S
GGGS
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GGGTS

TT
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   141........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  CARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGP
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Template Sequence  GLXQTLADELEGVTAVRANSINPGATRTGXRA. . . . . . . . . . . . . . . . . . . AYNPLNNPAPEDIXPVYLYLXGPDSTGI
Template Known Secondary structure  TTTSS

S
SSTTT
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GGGS

GGGGSGGGTT
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   175....180.........190.........200...... ...210.........220.........230....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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