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Job DescriptionP77775
Confidence97.67%DateThu Jan 5 12:32:44 GMT 2012
Rank324Aligned Residues199
% Identity12%Templatec3fi9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30.........40 .........50.........60.........70.
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Query Sequence  MNIVITGGTGLIGRHLIPRLLELGH. . QITVVTRNPQKASSV. . . . . . . LGPRVTLWQGLADQSNLNGVDAVINLAGEPI
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Template Sequence  EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG. . .
Template Known Secondary structure  SSTTSTT

S

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Query Sequence  ADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRA
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Template Sequence  . . . . . . . . TREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSG. LKPSQVTTLAGLDSTRLQSELA
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SSST.

GGG

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   152.......160......... 170.........180.........190.........200.........210.
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Query Sequence  QSDKTRVCLLRTGVVLAP. DGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWL
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Template Sequence  KHFGIKQSLVTNTRTYGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKG
Template Known Secondary structure  TS
GGG


SSGGG
GGG
TTGGGTTTBTTB
T
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   162.......170.........180.........190.........200.........210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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