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Job DescriptionP77775
Confidence98.96%DateThu Jan 5 12:32:44 GMT 2012
Rank115Aligned Residues214
% Identity10%Templatec3cxtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dehydrogenase with different specificities; PDBTitle: quaternary complex structure of gluconate 5-dehydrogenase from2 streptococcus suis type 2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........ .40.........50.........60 ....
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Query Sequence  NIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKAS. . . . . . . . . . . SVLGPRVTLWQGLADQSNLNGV. . . . . . DAVI
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Template Sequence  IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDIL
Template Known Secondary structure  T
SSTT
SSTT




TT
T



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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  NLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARW
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Template Sequence  VNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMS. . . . ELGRETVSAYAAAKGGLK
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GGGS
TT


GGG....T


TT
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   96...100.........110.........120.........130.........140.........150... ......160.........170.
 
   145....150... ......160.........170.........180.........190.........200.........210..... ...
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Query Sequence  EEIACRAQS. . . DKTRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNE. . . LRG
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Template Sequence  MLTKNIASEYGEANIQCNGIGPGYIATPQTHPFDQFIIA. . . . . . . . . . . KTPAARWGEAEDLMGPAVFLASDASNFVNG
Template Known Secondary structure  GGGT
SB

TT

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TT
S
B
SGGGTT

S
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   172.......180.........190.........200.........210 .........220.........230.........240
 
   219220.........230
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Query Sequence  PFNMVSPYPVRN
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Template Sequence  HILYVDGGILAY
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STTGGG
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   253......260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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