Job Description P77775 Confidence 100.00% Date Thu Jan 5 12:32:44 GMT 2012 Rank 44 Aligned Residues 287 % Identity 12% Template c3a1nB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ndp-sugar epimerase; PDBTitle: crystal structure of l-threonine dehydrogenase from2 hyperthermophilic archaeon thermoplasma volcanium Resolution 2.07 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	.	.	A	S	S	V	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E	P	I	A	D	K	R	W	T	H	E	Q
Query Conservation																																				.	.
Alig confidence																																				.	.
Template Conservation
Template Sequence		I	L	V	T	G	S	S	G	Q	I	G	T	E	L	V	P	Y	L	A	E	K	Y	G	K	K	N	V	I	A	S	D	I	V	Q	R	D	T	G	G	I	K	F	I	T	L	D	V	S	N	R	D	E	I	D	R	A	V	E	K	Y	S	I	D	A	I	F	H	L	A	G	I	L	S	A	K	G	E	K	D	P
Template Known Secondary structure						T	T	T	S																G	G	G						S	S					T	T								T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E	E	I	A	C	R	A	Q	S	D	K	T	R	V	C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	Y	K	V	N	M	N	G	T	Y	N	I	L	E	A	A	K	Q	H	R	V	E	K	V	V	I	P	S	T	I	G	V	F	G	P	E	T	P	K	N	K	V	P	S	I	T	I	T	R	P	R	T	M	Y	G	V	T	K	I	A	A	E	L	L	G	Q	Y	Y	Y	E	K	F	G	L	D	V	R	S
Template Known Secondary structure																						T	T										G	G	G			T	T	S		S	S	S	B		S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		L	R	T	G	V	V	L	A	P	D	G	G	.	.	.	.	.	.	.	.	I	L	G	K	M	L	P	P	F	R	L	G	L	G	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	.	.	.	.	R	G	P	F	N	M	V	S	P	Y	P	V
Query Conservation														.	.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation
Template Sequence		L	R	Y	P	G	I	I	S	Y	K	A	E	P	T	A	G	T	T	D	Y	A	V	E	I	F	Y	Y	A	V	K	R	E	K	Y	K	C	Y	L	A	P	N	R	A	L	P	M	M	Y	M	P	D	A	L	K	A	L	V	D	L	Y	E	A	D	R	D	K	L	V	L	R	N	G	Y	N	V	T	A	Y	T	F
Template Known Secondary structure										S	S	S						T	T	T											T	T						S	S		T	T																					S		T	T	T		S	S								S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	N	E	Q	F	A	H	A	L	G	H	A	L	H	R	P	A	I	L	R	V	P	A	T	A	I	R	L	L	M	G	E	S	S	V	L	V	L	G	G	Q	R	A	L	P	K	R	L	E	E	.	A	G	F	A	F	R	W	Y	D	L	E	E	A	L	A	D	V	V	R
Query Conservation																																																				.
Alig confidence																																	.	.	.	.	.	.	.													.								.
Template Conservation																																	.	.	.	.	.	.	.																					.
Template Sequence		T	P	S	E	L	Y	S	K	I	K	E	R	I	P	E	F	E	I	E	Y	K	E	D	F	R	D	K	I	A	A	T	.	.	.	.	.	.	.	W	P	E	S	L	D	S	S	E	A	S	N	E	W	G	F	S	I	E	Y	.	D	L	D	R	T	I	D	D	M	I	D
Template Known Secondary structure												T	T		T	T																T	.	.	.	.	.	.	.	S		S		B														S		.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																					.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.								.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions