Job Description P77775 Confidence 99.98% Date Thu Jan 5 12:32:44 GMT 2012 Rank 53 Aligned Residues 288 % Identity 16% Template c2x86K_ PDB info PDB header:isomerase Chain: K: PDB Molecule:adp-l-glycero-d-manno-heptose-6-epimerase; PDBTitle: agme bound to adp-b-mannose Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																																.
Query SS confidence																																								.	.	.	.																																.
Query Sequence		I	V	I	T	G	G	T	G	L	I	G	R	H	L	I	P	R	L	L	E	L	G	H	Q	I	T	V	V	T	R	N	P	Q	K	A	S	S	V	.	.	.	.	L	G	P	R	V	T	L	W	Q	G	L	A	D	Q	S	N	L	N	G	V	D	A	V	I	N	L	A	G	E	P	I	.	A	D	K	R	W	T
Query Conservation																																								.	.	.	.																																.
Alig confidence																																								.	.	.	.																																.
Template Conservation
Template Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C	S	S	T
Template Known Secondary structure						T	T	T	S													T	T											S	S	G	G	G	G					T	S			S															T				S	S									S				T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	Q	K	E	R	L	C	Q	S	R	W	N	I	T	Q	K	L	V	D	L	I	N	A	S	D	T	P	P	S	V	L	I	S	G	S	A	T	G	Y	Y	G	D	L	G	E	V	V	V	T	E	E	E	P	P	H	N	E	F	T	H	K	L	C	A	R	W	E	E	I	A	C	R	A	Q	S	D	K	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	F	G	Y	S	K	F	L	F	D	E	Y	V	R	Q	I	L	P	E	A	N	S	Q
Template Known Secondary structure		T											T															T									G	G	G	G		S		S	S				S	S	G	G	G				S	S																	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		158	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																	.	.
Query SS confidence															.	.	.	.	.	.	.																	.	.
Query Sequence		V	C	L	L	R	T	G	V	V	L	A	P	D	.	.	.	.	.	.	.	G	G	I	L	G	K	M	L	P	P	F	R	L	G	L	G	.	.	G	P	I	G	S	G	R	Q	Y	L	A	W	I	H	I	D	D	M	V	N	G	I	L	W	L	L	D	N	E	L	R	G	P	F	N	M	V	S	P	Y	P	V
Query Conservation															.	.	.	.	.	.	.																	.	.
Alig confidence															.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G	V	S	G	I	F	N	L	G	T	G	R	A	E
Template Known Secondary structure												S	S	S		G	G	G	G	G	G	S												T	T							T	T	G	G	G																														S		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	N	E	Q	F	A	H	A	L	G	H	A	L	H	R	P	A	I	L	R	V	P	A	T	A	I	R	L	L	M	G	E	S	S	V	L	V	L	G	G	Q	R	A	L	P	K	R	L	E	E	.	A	G	F	A	F	R	W	Y	D	L	E	E	A	L	A	D	V	V	R
Query Conservation																																																				.
Alig confidence																										.	.	.	.	.	.																					.								.
Template Conservation																										.	.	.	.	.	.																													.
Template Sequence		S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	P	.	.	.	.	.	.	D	K	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y	D	K	P	F	K	.	T	V	A	E	G	V	T	E	Y	M	A
Template Known Secondary structure															T											.	.	.	.	.	.	G	G	G	T	T	T			S	B											T	T							.
Template Predicted Secondary structure																										.	.	.	.	.	.																													.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions