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Job DescriptionP77775
Confidence100.00%DateThu Jan 5 12:32:44 GMT 2012
Rank21Aligned Residues280
% Identity18%Templatec2x4gA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of pa4631, a nucleoside-diphosphate-sugar2 epimerase from pseudomonas aeruginosa
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKAS. . . . . SVLGPRVTLWQGLADQSNLNGVDAVINLAGEPIADKR
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Template Sequence  VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSE. . . . . . . .
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   13......20.........30.........40.........50.........60.........70.........80....
 
   76...80.........90.........100.........110.........120.........130. ........140.........150.
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Query Sequence  WTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEP. . . . PHNEFTHKLCARWEEIACRA
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Template Sequence  . . . . . . . . EVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQ
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   97..100.........110.........120.........130.........140.........150.........160........
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  QSDKTRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNE
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Template Sequence  ARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMA
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   232.......240.........250.........260.. .......270........ .280.........290.......
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Query Sequence  QFAHALGHALHRPAILRVPATAIRLLMGESS. VLVLGGQRALPKRLEE. AGFAFRWYDLEEALADVVR
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Template Sequence  DLTRRIAELLGQPAPQPMSMAMARALATLGRLEVMAGGQFLDGRKAREELGFFSTT. ALDDTLLRAID
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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